Service registration form
Register INB parameters
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WhichNameSpaceForID (inb.bsc.es)
addDisulphideBondsFromPDBText (mmb.pcb.ub.es)
addHydrogensFromPDBText (mmb.pcb.ub.es)
addLigandToGROMACS_MD_Structure (mmb.pcb.ub.es)
browseCATHClassification (inb.bsc.es)
build3DstructureFromNucleotideSequence (mmb.pcb.ub.es)
build3DstructureWithHelicalParametersFromNucleotideSequence (mmb.pcb.ub.es)
cleanStructureFromPDBText (mmb.pcb.ub.es)
displayClustering (bioinfo.cipf.es)
displayDomainsFromAnnStructure (inb.bsc.es)
fixSideChainsFromPDBText (mmb.pcb.ub.es)
fromClustalwToPhylip (inb.bsc.es)
fromEMBLToMGI (www.cnb.csic.es)
fromEMBLToMGI (www.cnb.uam.es)
fromFASTAToAminoAcidSequence (genome.imim.es)
fromFASTAToAminoAcidSequenceCollection (genome.imim.es)
fromFASTAToDNASequence (genome.imim.es)
fromFASTAToDNASequenceCollection (genome.imim.es)
fromFastaToCommentedAASequence (inb.bsc.es)
fromFastaToCommentedNASequence (inb.bsc.es)
fromFastaToGenericSequence (inb.bsc.es)
fromFunCUTtoDASGFF (cnio.es)
fromGenericSequenceCollectionToFASTA (genome.imim.es)
fromGenericSequenceCollectionToFasta (inb.bsc.es)
fromGenericSequenceToFASTA (genome.imim.es)
fromGenericSequenceToFasta (inb.bsc.es)
fromGenericToAminoAcidSequence (inb.bsc.es)
fromGenericToNucleotideSequence (inb.bsc.es)
fromMD_TrajectoryToMD_TrajectoryBINPOS (mmb.pcb.ub.es)
fromMD_TrajectoryToMD_TrajectoryCRD (mmb.pcb.ub.es)
fromMD_TrajectoryToMD_TrajectoryDCD (mmb.pcb.ub.es)
fromMD_TrajectoryToMD_TrajectoryNetCDF (mmb.pcb.ub.es)
fromMD_TrajectoryToPDB_Collection (mmb.pcb.ub.es)
fromMGIToEMBL (www.cnb.csic.es)
fromMGIToRefSeq (www.cnb.csic.es)
fromMetaAlignmentsToScoreMatrix (genome.imim.es)
fromMetaAlignmentsToTextScoreMatrix (genome.imim.es)
fromNDBTextToPDBText (inb.bsc.es)
fromNDBTextTommCif (inb.bsc.es)
fromPDBTextToNDBText (inb.bsc.es)
fromPDB_CollectionToMD_TrajectoryNetCDF (mmb.pcb.ub.es)
frommmCifToNDBText (inb.bsc.es)
frommmCifToPDBText (inb.bsc.es)
getAAFromWeightedObject (cgl.imim.es)
getAMBER_MD_StructureFromPDBText (mmb.pcb.ub.es)
getAminoAcidSequence (inb.bsc.es)
getAminoAcidSequenceCollection (www.bioinfo.uma.es)
getAminoAcidSequenceFromPDB (mmb.pcb.ub.es)
getAminoAcidSequenceUMA (chirimoyo.ac.uma.es)
getAverageStructure (mmb.pcb.ub.es)
getAverageStructureFromMD_Trajectory (mmb.pcb.ub.es)
getBestHitsFromBlast (www.bioinfo.uma.es)
getCATHDomainsFromPDBID (inb.bsc.es)
getCATHHierarchyCodesFromPDBID (inb.bsc.es)
getCDSSequence (inb.bsc.es)
getCodonTableFromEmboss (inb.bsc.es)
getCrossReferencesInUniprot (inb.bsc.es)
getCrossReferencesSQL (inb.bsc.es)
getDocumentationFromProsite (inb.bsc.es)
getDryTrajectoryFromMD_Trajectory (mmb.pcb.ub.es)
getEnsemblIDsFromUniprot (inb.bsc.es)
getEntryFromCATH (inb.bsc.es)
getEntryFromDSSP (inb.bsc.es)
getEntryFromEMBL (inb.bsc.es)
getEntryFromFSSP (inb.bsc.es)
getEntryFromGenBank (inb.bsc.es)
getEntryFromOMIM (inb.bsc.es)
getEntryFromPDB (inb.bsc.es)
getEntryFromProsite (inb.bsc.es)
getEntryFromRefSeq (inb.bsc.es)
getEntryFromSCOPPath (inb.bsc.es)
getEntryFromSCOPwithPDBID (inb.bsc.es)
getEntryFromUniProt (inb.bsc.es)
getExpressionStatistics (www.cnb.csic.es)
getFeatureAASequenceFromUniprot (inb.bsc.es)
getGOTerm (inb.bsc.es)
getGROMACS_ConfFromGROMACS_MD_Structure (mmb.pcb.ub.es)
getGROMACS_ConfFromMD_TrajectoryXTC (mmb.pcb.ub.es)
getGROMACS_MD_StructureFromPDBText (mmb.pcb.ub.es)
getGeneListFromDifferentialExpressionTest (bioinfo.cipf.es)
getGeneWeightedListFromDifferentialExpressionTest (bioinfo.cipf.es)
getGraphFromTerm (inb.bsc.es)
getHSSPIDsFromUniprot (inb.bsc.es)
getHeaderFromPDB (mmb.pcb.ub.es)
getHomologiesFromEnsembl (inb.bsc.es)
getIDsFromBlast (cgl.imim.es)
getIdNameValueFromBlast (cgl.imim.es)
getInteractingMethods (pdg.cnb.uam.es)
getInteractionMethodDesc (pdg.cnb.uam.es)
getInteractions (pdg.cnb.uam.es)
getInteractionsXML (pdg.cnb.uam.es)
getMaskTrajectoryFromMD_Trajectory (mmb.pcb.ub.es)
getNAMD_ConfFromAMBER_MD_Structure (mmb.pcb.ub.es)
getNAMD_ConfFromMD_TrajectoryDCD (mmb.pcb.ub.es)
getNAMD_ConfFromNAMD_MD_Structure (mmb.pcb.ub.es)
getNAMD_MD_StructureFromPDBText (mmb.pcb.ub.es)
getNucleotideSequence (inb.bsc.es)
getPDBFromTransfac (mmb.pcb.ub.es)
getPDBIDsFromUniprot (inb.bsc.es)
getPDBIdsFromProteinID (cgl.imim.es)
getPersistentFile (inb.bsc.es)
getPersistentFile (mmb.pcb.ub.es)
getPrositeAnnStructure (inb.bsc.es)
getPrositeAnnStructureFromPDBID (inb.bsc.es)
getSequenceByRegionFromENSEMBL (inb.bsc.es)
getSequencesFromENSEMBLHomology (inb.bsc.es)
getSliceFromMD_Trajectory (mmb.pcb.ub.es)
getSnapshotFromMD_Trajectory (mmb.pcb.ub.es)
getStructureFromPDB (mmb.pcb.ub.es)
getTermsFromProduct (inb.bsc.es)
getTrajectoryBfactorPerResidue (mmb.pcb.ub.es)
getTrajectoryBfactorPerResidueFromMD_Trajectory (mmb.pcb.ub.es)
getTrajectoryRadiusOfGyrationFromMD_Trajectory (mmb.pcb.ub.es)
getTrajectoryRms (mmb.pcb.ub.es)
getTrajectoryRmsFromMD_Trajectory (mmb.pcb.ub.es)
getTrajectoryRmsPerResidue (mmb.pcb.ub.es)
getTrajectoryRmsPerResidueFromMD_Trajectory (mmb.pcb.ub.es)
getURLfromId (inb.bsc.es)
getUniProtIdsFromProteinID (cgl.imim.es)
getUniprotAccessionsFromID (inb.bsc.es)
getUniprotIDsFromAccession (inb.bsc.es)
getUniprotIDsFromGOTerm (inb.bsc.es)
getmmCifFileFromPDBID (inb.bsc.es)
loadPersistentFile (inb.bsc.es)
loadPersistentFile (mmb.pcb.ub.es)
multiplotArrayXYData (inb.bsc.es)
mutateResidueFromPDBText (mmb.pcb.ub.es)
optimizeStructureFromAMBER_MD_Structure (mmb.pcb.ub.es)
optimizeStructureFromGROMACS_MD_Structure (mmb.pcb.ub.es)
optimizeStructureFromNAMD_MD_Structure (mmb.pcb.ub.es)
optimizeStructureFromNAMD_Structure (inb.bsc.es)
overlappingFromBL2G (inb.bsc.es)
parseAminoAcidSequenceFromPDBText (mmb.pcb.ub.es)
parseAnatomicalStructures (www.cnb.csic.es)
parseBlastIDs (inb.bsc.es)
parseENSEMBLSliceInformation (inb.bsc.es)
parseExpressedGenes (www.cnb.csic.es)
parseExpressionStatistics (www.cnb.csic.es)
parseFeatureAASequenceFromFSOLVText (mmb.pcb.ub.es)
parseFeatureAASequenceFromPMUTText (mmb.pcb.ub.es)
parseFeatureAASequenceWithArticle (inb.bsc.es)
parseFromIntAct (pdg.cnb.uam.es)
parseGFFFromFeatureAASequence (mmb.pcb.ub.es)
parseMWfromMWAnnotatedAASequence (inb.bsc.es)
parseMatrixFromMotif (inb.bsc.es)
parseMotifMatricesFromMEME (genome.imim.es)
parseMultipleAlignFromBLASTText (mmb.pcb.ub.es)
parsePDBIntoChains (inb.bsc.es)
parsePDBIntoSeqs (inb.bsc.es)
parsePatternFromMotif (inb.bsc.es)
parsePropertySequenceFromFSOLVText (mmb.pcb.ub.es)
parsePropertySequenceFromPMUTText (mmb.pcb.ub.es)
parseRulesFromMotif (inb.bsc.es)
parseSwissIntoPDBids (inb.bsc.es)
plotArrayXYData (inb.bsc.es)
plotFeatureAASequence (mmb.pcb.ub.es)
protonateHistidinesFromMD_Structure (mmb.pcb.ub.es)
protonateHistidinesFromPDBText (mmb.pcb.ub.es)
protonateIonizableResiduesFromMD_Structure (mmb.pcb.ub.es)
protonateIonizableResiduesFromPDBText (mmb.pcb.ub.es)
removeDuplicatedObjects (inb.bsc.es)
runBindProteins (mmb.pcb.ub.es)
runBlast2gene (inb.bsc.es)
runBlastXP (cgl.imim.es)
runBlat (inb.bsc.es)
runBrownianMDFromPDBText (mmb.pcb.ub.es)
runClustalwFast (inb.bsc.es)
runClustalwFast (www.cnb.uam.es)
runClustalwFastUMA (chirimoyo.ac.uma.es)
runClustalwFull (inb.bsc.es)
runClustering (bioinfo.cipf.es)
runCreateTreeFromClustalw (www.bioinfo.uma.es)
runDecypherBlastn (cnio.es)
runDecypherBlastp (cnio.es)
runDecypherBlastx (cnio.es)
runDifferentialExpressionTest (bioinfo.cipf.es)
runDiscreteMDFromPDBText (mmb.pcb.ub.es)
runDisruptionPhysicalProperties (mmb.pcb.ub.es)
runEmbossAntigenicFromSequence (inb.bsc.es)
runEmbossChargeFromSequence (inb.bsc.es)
runEmbossCodcmpFromTables (inb.bsc.es)
runEmbossConsFromAlignment (inb.bsc.es)
runEmbossCpGplotFromSequence (inb.bsc.es)
runEmbossCpGreportFromSequence (inb.bsc.es)
runEmbossCpGreport_GFF_FromFasta (mmb.pcb.ub.es)
runEmbossCuspFromSequence (inb.bsc.es)
runEmbossDigestFromSequence (inb.bsc.es)
runEmbossEmowse (inb.bsc.es)
runEmbossEquicktandemFromSequence (inb.bsc.es)
runEmbossFindkm (inb.bsc.es)
runEmbossGetorfFromSequence (inb.bsc.es)
runEmbossIepFromSequence (inb.bsc.es)
runEmbossNeedleFromSequences (inb.bsc.es)
runEmbossOctanolFromSequence (inb.bsc.es)
runEmbossPatmatdb (inb.bsc.es)
runEmbossPatmatdbFromSequence (inb.bsc.es)
runEmbossPatmatmotifsFromSequence (inb.bsc.es)
runEmbossPepcoilFromSequence (inb.bsc.es)
runEmbossPepinfoFromSequence (inb.bsc.es)
runEmbossPepstatsFromSequence (inb.bsc.es)
runEmbossPepwindowFromSequence (inb.bsc.es)
runEmbossPepwindowallFromSequences (inb.bsc.es)
runEmbossRestrictFromSequence (inb.bsc.es)
runEmbossSigcleaveFromSequence (inb.bsc.es)
runEmbossTFscanFromSequence (inb.bsc.es)
runEmbossTFscan_GFF_FromFasta (mmb.pcb.ub.es)
runEmbossTmapFromSequence (inb.bsc.es)
runEmbossTranseqFromSequence (inb.bsc.es)
runEmbossWaterFromSequences (inb.bsc.es)
runFASS (cnio.es)
runFASSFromClustalw (cnio.es)
runFASSFromMSF (cnio.es)
runFastaForAminoAcids (inb.bsc.es)
runFastaForNucleotides (inb.bsc.es)
runFasts (inb.bsc.es)
runFastx (inb.bsc.es)
runFasty (inb.bsc.es)
runFatiGO (bioinfo.cipf.es)
runFatiScan (bioinfo.cipf.es)
runFlexibilityPhysicalProperties (mmb.pcb.ub.es)
runFunCUT (cnio.es)
runGeneIDGFF (genome.imim.es)
runGenewise (inb.bsc.es)
runHMMBuild (inb.bsc.es)
runHMMPfam (inb.bsc.es)
runHMMSearchAgainstDB (inb.bsc.es)
runHMMSearchAgainstSeqs (inb.bsc.es)
runISS (cnio.es)
runISSComplete (cnio.es)
runLeapFromAMBER_MD_Structure (mmb.pcb.ub.es)
runLeapFromPDBText (mmb.pcb.ub.es)
runLeapWithLigandsFromPDBText (mmb.pcb.ub.es)
runMB (cnio.es)
runMDFromAMBER_MD_Structure (mmb.pcb.ub.es)
runMDFromGROMACS_MD_Structure (mmb.pcb.ub.es)
runMDFromMD_TrajectoryDCD (mmb.pcb.ub.es)
runMDFromMD_TrajectoryXTC (mmb.pcb.ub.es)
runMDFromNAMD_MD_Structure (mmb.pcb.ub.es)
runMatScanGFF (genome.imim.es)
runMatScanGFFCollection (genome.imim.es)
runMatScanGFFCollectionVsInputMatrices (genome.imim.es)
runMemeHTML (genome.imim.es)
runMemeText (genome.imim.es)
runMetaAlignment (genome.imim.es)
runMetaAlignmentGFF (genome.imim.es)
runMultiPairwiseMetaAlignment (genome.imim.es)
runMultiPairwiseMetaAlignmentGFF (genome.imim.es)
runMuscleFromSequences (inb.bsc.es)
runNCBIBlastAgainstDB (inb.bsc.es)
runNCBIBlastAgainstDBFromFASTA (inb.bsc.es)
runNCBIBlastn (inb.bsc.es)
runNCBIBlastnXML (inb.bsc.es)
runNCBIBlastn_2Seqs (inb.bsc.es)
runNCBIBlastp (inb.bsc.es)
runNCBIBlastp1 (chirimoyo.ac.uma.es)
runNCBIBlastpXML (inb.bsc.es)
runNCBIBlastp_2Seqs (inb.bsc.es)
runNCBIBlastx (inb.bsc.es)
runNCBIBlastxXML (inb.bsc.es)
runNCBIBlastx_2Seqs (inb.bsc.es)
runNCBIFormatdb (inb.bsc.es)
runNCBITBlastn (inb.bsc.es)
runNCBITBlastnXML (inb.bsc.es)
runNCBITBlastn_2Seqs (inb.bsc.es)
runNCBITBlastx (inb.bsc.es)
runNCBITBlastxXML (inb.bsc.es)
runNCBITBlastx_2Seqs (inb.bsc.es)
runNCut (cnio.es)
runNonlinearPhysicalProperties (mmb.pcb.ub.es)
runNormalModeAnalysisFromPDBText (mmb.pcb.ub.es)
runOFunCUT (cnio.es)
runPHDFromAminoAcidSequence (mmb.pcb.ub.es)
runPHDFromBLASTText (mmb.pcb.ub.es)
runPHDFromFASTA (mmb.pcb.ub.es)
runPMUTHotSpotFromAminoAcidSequence (mmb.pcb.ub.es)
runPMUTHotSpotFromBLASTText (mmb.pcb.ub.es)
runPMUTHotSpotFromFASTA (mmb.pcb.ub.es)
runPPSearchAgainstProsite (inb.bsc.es)
runPSIBlastpFromAminoAcidSequence (mmb.pcb.ub.es)
runPSIBlastpFromFASTA (mmb.pcb.ub.es)
runParmbsc0PhysicalProperties (mmb.pcb.ub.es)
runPhylipDnadist (inb.bsc.es)
runPhylipDnaml (inb.bsc.es)
runPhylipDnaml (www.cnb.uam.es)
runPhylipDnamlk (inb.bsc.es)
runPhylipDnapars (inb.bsc.es)
runPhylipDnapenny (inb.bsc.es)
runPhylipFitch (inb.bsc.es)
runPhylipKitsch (inb.bsc.es)
runPhylipNeighbor (inb.bsc.es)
runPhylipProtdist (inb.bsc.es)
runPhylipProtpars (inb.bsc.es)
runPratt (inb.bsc.es)
runPredictorTraining (bioinfo.cipf.es)
runPreprocessing (bioinfo.cipf.es)
runProStar_GFF_FromFasta (mmb.pcb.ub.es)
runPs_scanAgainstProsite (inb.bsc.es)
runPs_scanAgainstSequence (inb.bsc.es)
runSGP2GFF (genome.imim.es)
runSIAM (cnio.es)
runSM (cnio.es)
runSQUARE (cnio.es)
runSimpleTfbs (mmb.pcb.ub.es)
runStabilityPhysicalProperties (mmb.pcb.ub.es)
runStructurePhysicalProperties (mmb.pcb.ub.es)
runTFastx (inb.bsc.es)
runTFasty (inb.bsc.es)
runTcoffeeEvaluateAlignments (inb.bsc.es)
runTcoffeeFromSequences (inb.bsc.es)
runUnusualPhysicalProperties (mmb.pcb.ub.es)
runWUBlastn (inb.bsc.es)
runWUBlastn_2Seqs (inb.bsc.es)
runWUBlastp (inb.bsc.es)
runWUBlastp_2Seqs (inb.bsc.es)
runWUBlastx (inb.bsc.es)
runWUBlastx_2Seqs (inb.bsc.es)
runWUTBlastn (inb.bsc.es)
runWUTBlastn_2Seqs (inb.bsc.es)
runWUTBlastx (inb.bsc.es)
runWUTBlastx_2Seqs (inb.bsc.es)
searchBLOCKS (inb.bsc.es)
searchInterPro (inb.bsc.es)
show3DFeature (mmb.pcb.ub.es)
showFSOLVonStructure (mmb.pcb.ub.es)
showPDBFromFasta (mmb.pcb.ub.es)
showPMUTonStructure (mmb.pcb.ub.es)
solvateStructureFromAMBER_MD_Structure (mmb.pcb.ub.es)
solvateStructureFromGROMACS_MD_Structure (mmb.pcb.ub.es)
solvateStructureFromNAMD_MD_Structure (mmb.pcb.ub.es)
solvateStructureFromPDBText (mmb.pcb.ub.es)
solvateStructureWithLigandsFromAMBER_MD_Structure (mmb.pcb.ub.es)
solvateStructureWithLigandsFromPDBText (mmb.pcb.ub.es)
textDBQuery (inb.bsc.es)
titrateStructureFromMD_Structure (mmb.pcb.ub.es)
titrateStructureFromPDBText (mmb.pcb.ub.es)
translateGeneIDGFFPredictions (genome.imim.es)
Before registering INB parameters for your services, please read this document:
Service registrations are only valid in the official server (http://www.inab.org/MOWServ)